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个人信息Personal Information
研究员
博士生导师
硕士生导师
性别:男
毕业院校:清华大学
学位:博士
所在单位:力学与航空航天学院
学科:工程力学. 生物与纳米力学
办公地点:力学楼306
联系方式:0411-84706353 13332292398 cwwu@dlut.edu.cn
Functional modules and bottlenecks in human metabolic network core
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论文类型:期刊论文
发表时间:2011-01-01
发表刊物:JOURNAL OF BIOLOGICAL RESEARCH-THESSALONIKI
收录刊物:SCIE、Scopus
卷号:15
页面范围:113-121
ISSN号:1790-045X
关键字:centrality; biological network; modularity; scale-free; small-world
摘要:The objective of this paper was to study human metabolic network core by structural and functional analysis. Firstly, we edited the human metabolic network core derived from a high-quality human metabolic network model and studied its general global structural properties (degree distribution, average path length, etc.). The human metabolic network core is a "scale-free" and "small-world" network. Then, we studied modules in human metabolic network core based on simulated annealing algorithm. The functional significance of these modules for metabolism was investigated by comparing them to KEGG metabolic pathways. Finally, we studied central metabolites in human metabolic network core by multi-centrality measures and discussed their biological implications and pharmacological insight.