location: Current position: Home >> Scientific Research >> Paper Publications

Molecular cloning and expression analysis of SpWRKY6 gene from Solanum pimpinellifolium

Hits:

Indexed by:期刊论文

Date of Publication:2016-06-01

Journal:BIOLOGIA PLANTARUM

Included Journals:SCIE、Scopus

Volume:60

Issue:2

Page Number:226-234

ISSN No.:0006-3134

Key Words:abscisic acid; Botrytis cinerea; cold; drought; heat; methyl jasmonate; Phytophthora infestans; tomato; salicylic acid; salinity; WRKY transcription factors

Abstract:Ttranscription factors WRKY play vital roles in response to biotic and abiotic stresses, and previous studies have predominantly focused on model plants and fairly limited research has been performed with tomato. In the present study, a novel pathogen-induced WRKY gene named SpWRKY6 was isolated from the late blight resistant tomato (Solanum pimpinellifolium) cultivar L3708 using in silico cloning and reverse transcription polymerase chain reaction (RT-PCR) methods. Multiple sequence alignment with other plant WRKYs indicates that SpWRKY6 contains two WRKY domains and belongs to group I WRKY transcription factors. Furthermore, some cis-acting elements associated with responses to environmental stresses were observed in the promoter region of this gene. Gene expression patterns were determined by analyzing microarray data of SpWRKY6 in tomato and of an orthologous gene from Arabidopsis thaliana using the Genevestigator tool. The results reveal a very strong biotic and abiotic stress responsive behaviour of this gene. Moreover, bioinformatics results were confirmed by real time quantitative polymerase chain reaction and show that SpWRKY6 expression was rapidly induced after infection with Phytophthora infestans and Botrytis cinerea, respectively. Expression of SpWRKY6 was up-regulated by application of various phytohormones including salicylic acid, methyl jasmonate, and abscisic acid. Likewise, the SpWRKY6 expression was induced by NaCl, drought, heat, cold, and HgCl2 treatments.

Pre One:一种遗传转化方法在海洋红酵母(Rhodotorula mucilaginosa)中的应用

Next One:Protein function prediction based on data fusion and functional interrelationship