柳广飞

个人信息Personal Information

副教授

博士生导师

硕士生导师

性别:男

毕业院校:大连理工大学

学位:博士

所在单位:环境学院

学科:环境工程. 环境科学

办公地点:环境学院711室

联系方式:0411-84706252

电子邮箱:guangfeiliu@dlut.edu.cn

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Location and PCR analysis of catabolic genes in a novel Streptomyces sp DUT_AHX capable of degrading nitrobenzene

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论文类型:期刊论文

发表时间:2008-07-01

发表刊物:JOURNAL OF ENVIRONMENTAL SCIENCES

收录刊物:SCIE、EI、PubMed、ISTIC、CSCD

卷号:20

期号:7

页面范围:865-870

ISSN号:1001-0742

关键字:Streptomyces; nitrobenzene; degradation; plasmid curing; PCR

摘要:A novel strain of Streptomyces sp. DUT_AHX was isolated from sludge contaminated with nitrobenzene and identified on the basis of physiological and biochemical tests and 16S ribosomal DNA (rDNA) sequence analysis. The optimal degradation conditions were as follows: temperature 30 degrees C, pH 7.0-8.0, shaking speed 150-180 r/min, and inocula 10% (V/V). The strain, which possessed a partial reductive pathway with the release of ammonia, was also able to grow on mineral salts basal (MSB) medium plates with 2-aminophenol, phenol, or toluene as the sole carbon source. Furthermore, the enzyme activity tests showed crude extracts of nitrobenzene-grown DUT_AHX contained 2-aminophenol 1,6-dioxygenase activity. The 17-kb plasmid was isolated by the modified alkaline lysis method and was further cured by sodium dodecyl sulphate (SDS) together with 37 degrees C. As a result, the cured derivative strain DUT_AHX-4 lost the 2-aminophenol 1,6-dioxygenase activity. The results suggested that the catabolic genes encoding the nitrobenzene-degrading enzymes were plasmid-associated. Moreover, the plasmid DNA was amplified with degenerate primers by touchdown PCR and an expected size fragment (471 bp) was generated. The Blast results revealed that the gene encoding a 157 amino acid polypeptide was 39%-76% identical to YHS domain protein. The further examination of the plasmid would demonstrate the molecular basis of nitrobenzene catabolism in Streptomyces, such as regulation and genetic organization of the catabolic genes.